## Publications

. and Vanden-Eijnden, Eric, Dynamical Computation of the Density of States Using Nonequilibrium Importance Sampling,**Rotskoff, Grant**M*arXiv:1809.11132*, 2018

[arXiv] [abstract]- Hauwiller, Matthew R. and Frechette, Layne B. and Jones, Matthew R. and Ondry, Justin C. and
. and Geissler, Phillip and Alivisatos, A. Paul, Unraveling Kinetically-Driven Mechanisms of Gold Nanocrystal Shape Transformations Using Graphene Liquid Cell Electron Microscopy,**Rotskoff, Grant**M*Nano Letters*, 5731-5737, 2018

[doi] [abstract] . and Vanden-Eijnden, Eric, Parameters as interacting particles: asymptotic scaling, convexity, and error of neural networks,**Rotskoff, Grant**M*32nd Conference on Neural Information Processing Systems, Montréal, Canada.*, 2018

[abstract]. and Vanden-Eijnden, Eric, Neural networks as interacting particle systems: Asymptotic convexity of the loss landscape and universal scaling of the approximation error,**Rotskoff, Grant**M*arXiv:1805.00915*, 2018

[arXiv] [abstract]. and Geissler, Phillip L., Robust nonequilibrium pathways to microcompartment assembly,**Rotskoff, Grant**M*Proc. Natl. Acad. Sci. USA*, 2018

[doi] [arXiv] [abstract]., Mapping current fluctuations of stochastic pumps to nonequilibrium steady states,**Rotskoff, Grant**M*Phys. Rev. E*, 030101, 2017

[doi] [arXiv] [abstract]- Ye, Xingchen and Jones, Matthew R. and Frechette, Layne B. and Chen, Qian and Powers, Alexander S. and Ercius, Peter and Dunn, Gabriel and
. and Nguyen, Son C. and Adiga, Vivekananda P. and Zettl, Alex and Rabani, Eran and Geissler, Phillip L. and Alivisatos, A. Paul, Single-particle mapping of nonequilibrium nanocrystal transformations,**Rotskoff, Grant**M*Science*, 874–877, 2016

[doi] [abstract] - Gingrich, Todd R. and
. and Horowitz, Jordan M., Inferring microscopic dissipation rates from coarse-grained current fluctuations,**Rotskoff, Grant**M*J. Phys. A Math. Theor.*, 184004, 2017

[doi] [arXiv] [abstract] . and Crooks, Gavin E. and Vanden-Eijnden, Eric, Geometric approach to optimal nonequilibrium control: Minimizing dissipation in nanomagnetic spin systems,**Rotskoff, Grant**M*Phys. Rev. E*, 012148, 2017

[doi] [arXiv] [abstract]- Gingrich, Todd R. and
. and Crooks, Gavin E. and Geissler, Phillip L., Near-optimal protocols in complex nonequilibrium transformations,**Rotskoff, Grant**M*Proc. Natl. Acad. Sci. USA*, 10263-10268, 2016

[doi] [arXiv] [abstract] . and Crooks, Gavin E., Optimal control in nonequilibrium systems: Dynamic Riemannian geometry of the Ising model,**Rotskoff, Grant**M*Phys. Rev. E*, 060102, 2015

[doi] [arXiv] [abstract]- Vaikuntanathan, Suriyanarayanan and
**Rotskoff, Grant**and Hudson, Alexander and Geissler, Phillip L, Necessity of capillary modes in a minimal model of nanoscale hydrophobic solvation,*Proc. Natl. Acad. Sci. USA*, 201513659, 2016

[doi] [arXiv] [abstract] - Gingrich, Todd R and
and Vaikuntanathan, Suriyanarayanan and Geissler, Phillip L, Efficiency and large deviations in time-asymmetric stochastic heat engines,**Rotskoff, Grant**M*New J. Phys.*, 102003, 2014

[doi] [arXiv] [abstract] - Willett, Jonathan W and Herrou, Julien and Briegel, Ariane and
**Rotskoff, Grant**and Crosson, Sean, Structural asymmetry in a conserved signaling system that regulates division, replication, and virulence of an intracellular pathogen,*Proc. Natl. Acad. Sci. USA*, E3709–E3718, 2015

[doi] [abstract] - Pronk, Sander and Pouya, Iman and Lundborg, Magnus and
**Rotskoff, Grant**and Wesèn, Björn and Kasson, Peter M and Lindahl, Erik, Molecular Simulation Workflows as Parallel Algorithms: The Execution Engine of Copernicus, a Distributed High-Performance Computing Platform,*J. Chem. Theory Comput.*, 10.1073, 2015

[doi] [abstract] - Dama, James F and
**Rotskoff, Grant**and Parrinello, Michele and Voth, Gregory A, Transition-Tempered Metadynamics: Robust, convergent metadynamics via on-the-fly transition barrier estimation,*J. Chem. Theory Comput.*, 3626–3633, 2014

[doi] [abstract] - Herrou, Julien and
**Rotskoff, Grant**and Luo, Yun and Roux, Benoît and Crosson, Sean, Structural basis of a protein partner switch that regulates the general stress response of*α*-proteobacteria,*Proc. Natl. Acad. Sci. USA*, E1415–E1423, 2012

[doi] [abstract]

## Dissertation

**., The Statistical Dynamics of Nonequilibrium Control,**

**Rotskoff, Grant**M*Ph.D. Thesis*, University of California, Berkeley

[link] [abstract]