Recognition and Self-Recognition in a Life full of
Errors
Tsvi Tlusty, IAS
All organisms rely on noisy molecular recognition to convey,
process and store information. This stochastic biophysical setting
poses a tough problem: how to construct information processing
systems
that are
efficient and yet error-resilient? – The challenge of molecular
recognition is critical for the ribosome, the molecular engine of
self-replication: In order to
synthesize proteins, ribosomes have to select the correct building
blocks
from a large pool of similar substrates, and inaccurate or
inefficient
selection might be devastating to the organism. We will discuss
the performance of
the ribosome in this task and the possible role of its large
conformational
changes. The analysis suggests a generic mechanism, and we will
examine it the context
of other molecular recognition systems, such as homologous
recombination or
basically any enzymatic process in the presence of competing
substrates.
Finally, we will briefly mention some of challenges and
possibilities of the
present approach.